The fastest Python implementation of the ForceAtlas2 graph layout algorithm, with Cython optimization for 10-100x speedup. Supports NetworkX, igraph, and raw adjacency matrices. ForceAtlas2 is a force ...

Gephi is an award-winning open-source platform for visualizing and manipulating large graphs. It runs on Windows, Mac OS X and Linux. Localization is available in English, French, Spanish, Japanese, ...

Networks are one of the most common ways to represent biological systems as complex sets of binary interactions or relations between different bioentities. In this article, we discuss the basic graph ...

The latest advances in high-throughput techniques during the past decade allowed the systems biology field to expand significantly. Today, the focus of biologists has shifted from the study of ...

An everyday problem in our industry is understanding how software is consuming resources, particularly CPUs. What exactly is consuming how much, and how did this change since the last software version ...

The development of new technologies for mapping structural and functional brain connectivity has led to the creation of comprehensive network maps of neuronal circuits and systems. The architecture of ...